STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH15153.1Hypothetical protein; KEGG: ppy:PPE_04547 5.7e-08 Sirohydrochlorin cobaltochelatase (CbiXL) K03795; Psort location: Cytoplasmic, score: 7.50. (97 aa)    
Predicted Functional Partners:
ERH15152.1
Putative HTH-type transcriptional repressor CzrA; KEGG: apb:SAR116_2180 5.7e-07 ArsR family transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
 
     0.821
ERH20147.1
KEGG: rdn:HMPREF0733_10735 7.9e-65 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
  
 0.809
ERH19426.1
Putative manganese transport system ATP-binding protein MntA; KEGG: pbs:Plabr_1432 1.3e-62 phosphonate-transporting ATPase K11710; Psort location: CytoplasmicMembrane, score: 8.78.
  
 0.809
ERH15151.1
Helicase protein; KEGG: eca:ECA1589 0. lhr; ATP-dependent helicase Lhr K03724; Psort location: Cytoplasmic, score: 7.50.
 
     0.615
ERH14285.1
KEGG: cfi:Celf_2326 1.4e-67 ABC transporter-like protein; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96.
    
  0.571
ERH20146.1
Putative iron/manganese ABC transporter, periplasmic iron/manganese-binding protein; KEGG: sah:SaurJH1_2478 1.5e-10 ribulose-phosphate 3-epimerase K01783; Psort location: CytoplasmicMembrane, score: 8.78; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.548
ERH19427.1
ABC transporter, substrate-binding protein; KEGG: saj:SaurJH9_2430 3.3e-16 ribulose-phosphate 3-epimerase K01783; Psort location: CytoplasmicMembrane, score: 9.81; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.548
ERH14286.1
ABC transporter, substrate-binding protein; KEGG: saj:SaurJH9_2430 2.1e-32 ribulose-phosphate 3-epimerase K01783; Psort location: CytoplasmicMembrane, score: 9.81; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.548
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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