STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH15160.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (181 aa)    
Predicted Functional Partners:
pheT
KEGG: ahe:Arch_0956 1.6e-297 phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain; Psort location: Cytoplasmic, score: 9.97.
     
 0.823
ERH18985.1
Trypsin; KEGG: pfr:PFREUD_02310 1.1e-60 htrA2; secreted serine protease, trypsin-like serine proteases K01362.
    
 
 0.635
ERH15158.1
Putative UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; KEGG: ahe:Arch_1521 2.6e-82 glucosamine-1-phosphate N-acetyltransferase K04042; Psort location: Cytoplasmic, score: 9.97.
       0.420
ERH15161.1
Transcriptional regulator, ArsR family; KEGG: rde:RD1_2397 0.00033 arsC; arsenate reductase; K03741 arsenate reductase.
       0.420
prs
Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
       0.415
ERH15162.1
Hypothetical protein; KEGG: ctt:CtCNB1_1062 0.0035 NADH-ubiquinone/plastoquinone oxidoreductase; K00330 NADH-quinone oxidoreductase subunit A; Psort location: CytoplasmicMembrane, score: 10.00.
       0.408
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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