STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH14943.1Putative DNA internalization competence protein ComEC/Rec2-like protein; KEGG: nph:NP4032A 3.1e-05 hydrolase (hydroxyacylglutathione hydrolase) 7 K01069; Psort location: CytoplasmicMembrane, score: 10.00. (689 aa)    
Predicted Functional Partners:
ERH14942.1
KEGG: cfi:Celf_2369 7.8e-74 DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta; Psort location: Cellwall, score: 8.75.
   
 0.856
pheT
KEGG: ahe:Arch_0956 1.6e-297 phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.833
ERH15368.1
KEGG: apb:SAR116_0616 1.6e-36 DNA protecting protein DprA K04096; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.774
ERH19230.1
Phosphoribosyl transferase domain protein; KEGG: cfl:Cfla_0563 0.00026 HhH-GPD family protein; K03575 A/G-specific adenine glycosylase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.750
ERH19463.1
comEA protein; KEGG: bxe:Bxe_A2823 1.2e-06 ribosomal large subunit pseudouridine synthase B K06178; Psort location: CytoplasmicMembrane, score: 9.51.
  
  
 0.747
ERH19856.1
Peptidase, A24 family; KEGG: mil:ML5_6207 9.5e-14 peptidase a24a prepilin type iv; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.722
ERH16697.1
HRDC domain protein; KEGG: bcv:Bcav_2897 4.6e-195 UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.673
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.601
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
     
 0.599
ERH15369.1
Mg chelatase-like protein; KEGG: fal:FRAAL5784 9.9e-106 magnesium chelatase K07391; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.578
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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