STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH14364.1ABC transporter, permease protein; KEGG: bra:BRADO1094 5.2e-29 appB; oligopeptide transport system permease K02033; Psort location: CytoplasmicMembrane, score: 10.00. (327 aa)    
Predicted Functional Partners:
ERH14365.1
KEGG: bra:BRADO1095 1.8e-33 oppC; peptide ABC transporter membrane protein K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.995
ERH14366.1
Putative phosphonate C-P lyase system protein PhnK; KEGG: car:cauri_2083 2.3e-216 oppD; glutathione import ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.96; Belongs to the ABC transporter superfamily.
 
 
 0.990
ERH14367.1
ABC transporter, substrate-binding protein, family 5; KEGG: esi:Exig_1344 4.3e-18 nickel ABC transporter periplasmic nickel-binding protein K15584; Psort location: Cellwall, score: 9.20.
 
 0.985
ERH15266.1
ABC transporter, ATP-binding protein; KEGG: smq:SinmeB_4047 2.5e-45 Nickel-transporting ATPase., Molybdate-transporting ATPase; Psort location: CytoplasmicMembrane, score: 8.78.
 
 
 0.971
ERH17001.1
ABC transporter, substrate-binding protein, family 5; KEGG: cau:Caur_1362 1.1e-26 4-phytase K02035; Psort location: Cellwall, score: 9.21.
 
 0.959
ERH15265.1
ABC transporter, permease protein; KEGG: pfe:PSF113_0899 5.6e-16 dppC2; protein DppC K12370; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.908
ERH15264.1
KEGG: apb:SAR116_0066 5.9e-21 peptide ABC transporter permease-like protein K02033; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.700
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
 0.615
ERH17002.1
Hypothetical protein; KEGG: rha:RHA1_ro09047 2.7e-16 peptide ABC transporter permease K02033; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.581
ERH19566.1
ABC transporter, ATP-binding protein; KEGG: ssg:Selsp_1191 7.7e-83 Monosaccharide-transporting ATPase K02006; Psort location: CytoplasmicMembrane, score: 9.96.
  
 
 0.471
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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