STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH14299.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. (175 aa)    
Predicted Functional Partners:
ERH16995.1
Hypothetical protein; KEGG: lxx:Lxx01060 9.8e-06 hemG; protoporphyrinogen oxidase; K00231 oxygen-dependent protoporphyrinogen oxidase.
  
    0.547
ERH14300.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.547
ERH16669.1
Hypothetical protein.
  
     0.519
ERH14207.1
Beta-ketoacyl synthase protein; KEGG: cva:CVAR_2516 0. fas; fatty acid synthase K11533; Psort location: CytoplasmicMembrane, score: 8.78.
 
     0.498
ERH14727.1
MaoC-like protein; KEGG: cva:CVAR_2516 0. fas; fatty acid synthase K11533; Psort location: Cytoplasmic, score: 7.50.
 
     0.493
ERH16644.1
GIY-YIG catalytic domain protein; KEGG: cfi:Celf_2178 2.1e-142 DNA polymerase III subunit epsilon K02342; Psort location: Cytoplasmic, score: 9.97.
 
     0.412
ERH16753.1
Putative CpaE-like protein; KEGG: ase:ACPL_5639 6.4e-05 wzc; receptor protein-tyrosine kinase.
  
     0.409
Your Current Organism:
Actinobaculum sp. F0552
NCBI taxonomy Id: 1227261
Other names: A. sp. oral taxon 183 str. F0552, Actinobaculum sp. oral taxon 183 str. F0552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.