STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI64163.1Septum formation initiator; KEGG: bcp:BLBCPU_503 2.9e-12 uridine kinase. (99 aa)    
Predicted Functional Partners:
ERI63069.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
 
 
 0.953
ERI64162.1
Uridine kinase; KEGG: ccm:Ccan_09630 6.0e-83 cytidine monophosphokinase K00876; Psort location: Cytoplasmic, score: 9.97.
       0.837
ERI64164.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.823
ERI64648.1
Hypothetical protein; KEGG: ccm:Ccan_04020 3.3e-98 putative Agmatinase; Psort location: Cytoplasmic, score: 8.96.
  
     0.634
ERI64159.1
NlpC/P60 family protein; KEGG: zga:zobellia_466 1.0e-48 dipeptidyl peptidase; Psort location: Cytoplasmic, score: 9.97.
 
     0.625
ERI64314.1
Hypothetical protein; KEGG: pdi:BDI_2264 9.1e-06 rpoB; DNA-directed RNA polymerase subunit beta K03043; Psort location: Cytoplasmic, score: 8.96.
  
     0.555
rlmH
Putative rRNA large subunit m3Psi methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.553
ERI64161.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.553
ERI63279.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.524
ERI63601.1
Hypothetical protein; KEGG: dti:Desti_1469 6.5e-06 parvulin-like peptidyl-prolyl isomerase; K03769 peptidyl-prolyl cis-trans isomerase C.
 
  
 0.514
Your Current Organism:
Capnocytophaga sp. F0517
NCBI taxonomy Id: 1227266
Other names: C. sp. oral taxon 863 str. F0517, Capnocytophaga sp. oral taxon 863 str. F0517
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.