node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERK47704.1 | ERK51990.1 | HMPREF1552_02291 | HMPREF1552_00891 | KEGG: apb:SAR116_1635 0.00021 protein-export protein SecB K03071; Psort location: Cytoplasmic, score: 8.96. | Stage III sporulation protein J family protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.650 |
ERK47704.1 | ERK52864.1 | HMPREF1552_02291 | HMPREF1552_00630 | KEGG: apb:SAR116_1635 0.00021 protein-export protein SecB K03071; Psort location: Cytoplasmic, score: 8.96. | Preprotein translocase, SecE subunit; Belongs to the SecE/SEC61-gamma family. | 0.655 |
ERK47704.1 | ERK55586.1 | HMPREF1552_02291 | HMPREF1552_00106 | KEGG: apb:SAR116_1635 0.00021 protein-export protein SecB K03071; Psort location: Cytoplasmic, score: 8.96. | Preprotein translocase, YajC subunit; KEGG: apb:SAR116_0407 1.9e-08 YajC K03210. | 0.723 |
ERK47704.1 | ffh | HMPREF1552_02291 | HMPREF1552_00291 | KEGG: apb:SAR116_1635 0.00021 protein-export protein SecB K03071; Psort location: Cytoplasmic, score: 8.96. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.650 |
ERK47704.1 | ftsY | HMPREF1552_02291 | HMPREF1552_01085 | KEGG: apb:SAR116_1635 0.00021 protein-export protein SecB K03071; Psort location: Cytoplasmic, score: 8.96. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.650 |
ERK47704.1 | secA | HMPREF1552_02291 | HMPREF1552_02332 | KEGG: apb:SAR116_1635 0.00021 protein-export protein SecB K03071; Psort location: Cytoplasmic, score: 8.96. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.974 |
ERK47704.1 | secD | HMPREF1552_02291 | HMPREF1552_01770 | KEGG: apb:SAR116_1635 0.00021 protein-export protein SecB K03071; Psort location: Cytoplasmic, score: 8.96. | Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.650 |
ERK47704.1 | secF | HMPREF1552_02291 | HMPREF1552_01769 | KEGG: apb:SAR116_1635 0.00021 protein-export protein SecB K03071; Psort location: Cytoplasmic, score: 8.96. | Export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.650 |
ERK47704.1 | secY | HMPREF1552_02291 | HMPREF1552_00184 | KEGG: apb:SAR116_1635 0.00021 protein-export protein SecB K03071; Psort location: Cytoplasmic, score: 8.96. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.650 |
ERK51990.1 | ERK47704.1 | HMPREF1552_00891 | HMPREF1552_02291 | Stage III sporulation protein J family protein; Psort location: CytoplasmicMembrane, score: 10.00. | KEGG: apb:SAR116_1635 0.00021 protein-export protein SecB K03071; Psort location: Cytoplasmic, score: 8.96. | 0.650 |
ERK51990.1 | ERK52864.1 | HMPREF1552_00891 | HMPREF1552_00630 | Stage III sporulation protein J family protein; Psort location: CytoplasmicMembrane, score: 10.00. | Preprotein translocase, SecE subunit; Belongs to the SecE/SEC61-gamma family. | 0.847 |
ERK51990.1 | ERK55586.1 | HMPREF1552_00891 | HMPREF1552_00106 | Stage III sporulation protein J family protein; Psort location: CytoplasmicMembrane, score: 10.00. | Preprotein translocase, YajC subunit; KEGG: apb:SAR116_0407 1.9e-08 YajC K03210. | 0.656 |
ERK51990.1 | ffh | HMPREF1552_00891 | HMPREF1552_00291 | Stage III sporulation protein J family protein; Psort location: CytoplasmicMembrane, score: 10.00. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.709 |
ERK51990.1 | ftsY | HMPREF1552_00891 | HMPREF1552_01085 | Stage III sporulation protein J family protein; Psort location: CytoplasmicMembrane, score: 10.00. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.674 |
ERK51990.1 | secA | HMPREF1552_00891 | HMPREF1552_02332 | Stage III sporulation protein J family protein; Psort location: CytoplasmicMembrane, score: 10.00. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.760 |
ERK51990.1 | secD | HMPREF1552_00891 | HMPREF1552_01770 | Stage III sporulation protein J family protein; Psort location: CytoplasmicMembrane, score: 10.00. | Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.921 |
ERK51990.1 | secF | HMPREF1552_00891 | HMPREF1552_01769 | Stage III sporulation protein J family protein; Psort location: CytoplasmicMembrane, score: 10.00. | Export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.891 |
ERK51990.1 | secY | HMPREF1552_00891 | HMPREF1552_00184 | Stage III sporulation protein J family protein; Psort location: CytoplasmicMembrane, score: 10.00. | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.911 |
ERK52864.1 | ERK47704.1 | HMPREF1552_00630 | HMPREF1552_02291 | Preprotein translocase, SecE subunit; Belongs to the SecE/SEC61-gamma family. | KEGG: apb:SAR116_1635 0.00021 protein-export protein SecB K03071; Psort location: Cytoplasmic, score: 8.96. | 0.655 |
ERK52864.1 | ERK51990.1 | HMPREF1552_00630 | HMPREF1552_00891 | Preprotein translocase, SecE subunit; Belongs to the SecE/SEC61-gamma family. | Stage III sporulation protein J family protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.847 |