STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERK52969.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: btl:BALH_2875 7.7e-99 sensor histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88. (454 aa)    
Predicted Functional Partners:
ERK52248.1
Dihydrolipoyl dehydrogenase; KEGG: lba:Lebu_0545 3.3e-272 dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
    
 0.985
ERK52968.1
Putative transcriptional activator protein IrlR; KEGG: cnc:CNE_2c16400 3.4e-48 czcS; sensor protein CzcS K07665; Psort location: Cytoplasmic, score: 9.97.
  0.975
ERK49131.1
KEGG: rha:RHA1_ro05622 7.4e-46 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.97.
 
  0.901
ERK53122.1
Putative transcriptional activator protein IrlR; KEGG: cnc:CNE_2c16400 6.6e-45 czcS; sensor protein CzcS K07665; Psort location: Cytoplasmic, score: 9.97.
  0.892
ERK53253.1
Putative response regulator ArlR; KEGG: cnc:CNE_2c16400 4.5e-46 czcS; sensor protein CzcS K07665; Psort location: Cytoplasmic, score: 9.97.
 
  0.891
ERK49716.1
KEGG: rha:RHA1_ro05622 1.2e-47 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.97.
 
  0.891
ERK50502.1
KEGG: bbp:BBPR_1604 6.6e-29 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
  
  0.888
ERK53111.1
Putative transcriptional regulatory protein ResD; KEGG: npu:Npun_F5788 1.5e-40 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97.
  0.887
ERK53397.1
KEGG: rha:RHA1_ro05622 7.9e-26 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.97.
 
  0.882
ERK52970.1
Peptidase propeptide and YPEB domain protein; KEGG: suw:SATW20_27750 0.0037 aur; zinc metalloproteinase aureolysin precursor.
 
    0.825
Your Current Organism:
Leptotrichia sp. F0557
NCBI taxonomy Id: 1227268
Other names: L. sp. oral taxon 879 str. F0557, Leptotrichia sp. oral taxon 879 str. F0557
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