STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERK52560.1Hypothetical protein; KEGG: cfu:CFU_0986 2.5e-41 autotransporter subtilase family protease; Psort location: OuterMembrane, score: 9.49. (224 aa)    
Predicted Functional Partners:
ERK47692.1
Autotransporter beta-domain protein; KEGG: eci:UTI89_C1627 4.0e-87 entS; EntS/YbdA MFS transporter K12516.
  
     0.770
ERK46870.1
Hypothetical protein; KEGG: eci:UTI89_C4946 8.2e-15 ShlA/HecA/FhaA exofamily protein K15125; Psort location: OuterMembrane, score: 9.92.
  
    0.759
ERK53176.1
Peptidase, S8/S53 family; KEGG: fnu:FN1950 8.6e-68 serine protease K01362; Psort location: OuterMembrane, score: 9.83.
 
     0.742
ERK48495.1
Methyltransferase domain protein; KEGG: fnu:FN0641 2.0e-84 methyltransferase K00599; Psort location: Cytoplasmic, score: 8.96.
  
     0.734
ERK46379.1
Hypothetical protein; KEGG: cco:CCC13826_0608 2.7e-06 ATP phosphoribosyltransferase (ATP-PRTase; ATP-PRT); Psort location: OuterMembrane, score: 10.00.
  
  
 0.710
ERK48383.1
Hypothetical protein; KEGG: msl:Msil_2844 0.0061 heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase; Psort location: Cytoplasmic, score: 8.96.
  
     0.658
ERK48274.1
Hypothetical protein; KEGG: cfu:CFU_1360 6.1e-74 pspB; serine protease; Psort location: OuterMembrane, score: 9.83.
 
     0.658
ERK53265.1
Hypothetical protein; KEGG: cfu:CFU_3202 1.7e-11 serine protease.
  
     0.646
ERK49154.1
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
  
     0.634
ERK52047.1
Capsular polysaccharide synthesis protein; KEGG: sbi:SORBI_02g036660 0.0022 SORBIDRAFT_02g036660, Sb02g036660; hypothetical protein; K01988 lactosylceramide 4-alpha-galactosyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
    0.494
Your Current Organism:
Leptotrichia sp. F0557
NCBI taxonomy Id: 1227268
Other names: L. sp. oral taxon 879 str. F0557, Leptotrichia sp. oral taxon 879 str. F0557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.