STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERK47886.1Hydrolase, NUDIX family; KEGG: sgg:SGGBAA2069_c14730 7.4e-62 MutT/NUDIX hydrolase family protein; Psort location: Cytoplasmic, score: 8.96. (216 aa)    
Predicted Functional Partners:
ERK52883.1
KEGG: apl:APL_0046 3.3e-66 nadR; nicotinamide-nucleotide adenylyltransferase K06211; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.776
ERK48139.1
KEGG: yey:Y11_38131 1.8e-81 nadr transcriptional regulator; Nicotinamide-nucleotide adenylyltransferase, NadR family; Ribosylnicotinamide kinase K06211; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.776
folE
GTP cyclohydrolase I; KEGG: lba:Lebu_1249 2.6e-89 GTP cyclohydrolase I; K01495 GTP cyclohydrolase I; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.756
ERK50840.1
KEGG: lba:Lebu_0381 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
    
 0.730
ERK47412.1
KEGG: apb:SAR116_0664 1.8e-13 molybdopterin binding domain-containing protein; Psort location: Cytoplasmic, score: 8.96.
    
  0.707
ERK47884.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.697
ERK47885.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.697
ERK50975.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.670
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
    
  0.622
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.559
Your Current Organism:
Leptotrichia sp. F0557
NCBI taxonomy Id: 1227268
Other names: L. sp. oral taxon 879 str. F0557, Leptotrichia sp. oral taxon 879 str. F0557
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