STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ70242.1Peptidase, M23 family; KEGG: nmd:NMBG2136_1236 1.6e-19 M23 peptidase domain-containing protein; Psort location: OuterMembrane, score: 9.83. (477 aa)    
Predicted Functional Partners:
ERJ72582.1
Efflux ABC transporter, permease protein; KEGG: bya:BANAU_3429 2.4e-09 ftsX; Macrolide export ATP-binding/permease protein macB K09811; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.897
ERJ70241.1
KEGG: pgi:PG0957 2.6e-50 ribF; riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
    0.813
ERJ70243.1
Hypothetical protein.
       0.806
ERJ72893.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.801
ERJ72060.1
Peptidase, M23 family; KEGG: ava:Ava_0183 8.2e-24 peptidase M23B; Psort location: OuterMembrane, score: 9.93.
 
   
 0.793
ERJ70240.1
Glycosyltransferase, group 1 family protein; KEGG: reh:H16_A2882 7.3e-24 rfaG1a; glycosyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.782
ERJ70236.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
 
     0.769
ERJ70239.1
Glycosyltransferase, group 1 family protein; KEGG: nde:NIDE3025 2.7e-21 putative mannosyltransferase; Psort location: Cytoplasmic, score: 9.97.
       0.768
ERJ70237.1
Glycosyltransferase, group 2 family protein; KEGG: bde:BDP_1839 3.1e-38 glycosyl transferase, family 2; Psort location: CytoplasmicMembrane, score: 7.88.
       0.767
ERJ72187.1
Tetratricopeptide repeat protein; KEGG: zga:zobellia_2271 1.1e-05 O-linked N-acetylglucosaminyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
 
   0.766
Your Current Organism:
Porphyromonas sp. W7784
NCBI taxonomy Id: 1227272
Other names: P. sp. oral taxon 278 str. W7784, Porphyromonas sp. oral taxon 278 str. W7784
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