STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ79276.1KEGG: pmz:HMPREF0659_A5353 1.8e-241 gdh_1; glutamate dehydrogenase, NAD-specific K00262; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (445 aa)    
Predicted Functional Partners:
ERJ80090.1
Pyruvate synthase; KEGG: pmz:HMPREF0659_A5561 0. nifJ; pyruvate synthase K03737.
  
 
 0.953
ERJ77636.1
Glutamate synthase; KEGG: pmz:HMPREF0659_A6962 0. gltA; glutamate synthase (NADPH), homotetrameric K00266; Psort location: Cytoplasmic, score: 9.97.
  
 0.780
ERJ74808.1
Putative NAD-dependent deacetylase; KEGG: pmz:HMPREF0659_A5082 6.9e-114 transcriptional regulator, Sir2 family; K12410 NAD-dependent deacetylase; Psort location: Cytoplasmic, score: 9.97.
   
 0.769
ERJ80001.1
KEGG: pmz:HMPREF0659_A6381 0. 2-oxoacid:acceptor oxidoreductase, alpha subunit; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.642
ERJ77297.1
Dihydrolipoyl dehydrogenase; KEGG: pmz:HMPREF0659_A6708 7.2e-222 lpdA; dihydrolipoyl dehydrogenase K00382; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.642
ERJ75741.1
KEGG: pmz:HMPREF0659_A5283 1.2e-173 lactate/malate dehydrogenase, NAD binding domain protein; K00024 malate dehydrogenase; Psort location: Cytoplasmic, score: 9.26; Belongs to the LDH/MDH superfamily.
   
 
 0.604
ERJ77894.1
KEGG: pmz:HMPREF0659_A5772 6.0e-115 nrfH; cytochrome c nitrate reductase, small subunit K15876.
   
 
 0.594
pckA
Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
  
 
 0.587
gcvPB
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.
   
 0.587
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.583
Your Current Organism:
Prevotella sp. F0091
NCBI taxonomy Id: 1227276
Other names: P. sp. F0091
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