STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D271_01038PTS system fructose-like transporter subunit EIIB; COG1445 Phosphotransferase system fructose-specific component IIB. (100 aa)    
Predicted Functional Partners:
D271_01043
PTS system fructose-like transporter subunit EIIC; COG1299 Phosphotransferase system, fructose-specific IIC component.
 
 0.995
D271_01058
PTS system, fructose-specific IIABC component; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
 0.975
D271_01048
PTS system fructose-like transporter subunit IIA; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
 
 0.953
D271_00828
PTS system fructose-specific transporter subunit IIABC; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
0.930
D271_04995
PTS system mannost-specific transporter subunits IIAB; COG2893 Phosphotransferase system, mannose/fructose-specific component IIA.
  
 
 0.898
D271_00833
1-phosphofructokinase; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
 
 0.873
D271_02689
PTS system transporter subunit IIABC trhalose specific; COG2190 Phosphotransferase system IIA components.
  
 
 0.801
D271_02889
PTS system sucrose-specific transporter subunits IIBCA; COG1264 Phosphotransferase system IIB components.
  
 
 0.801
D271_01033
COG4573 Predicted tagatose 6-phosphate kinase.
 
    0.755
D271_05355
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
  
 
 0.696
Your Current Organism:
Lactobacillus saerimneri
NCBI taxonomy Id: 1227363
Other names: L. saerimneri 30a, Lactobacillus saerimneri 30a
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