STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D271_02704Hypothetical protein. (343 aa)    
Predicted Functional Partners:
D271_05510
COG4990 Uncharacterized protein conserved in bacteria.
 
 
   0.846
D271_07554
Mucus binding protein.
 
  
  0.788
D271_02709
Hypothetical protein.
       0.759
D271_02699
Hypothetical protein.
       0.710
D271_04684
COG3142 Uncharacterized protein involved in copper resistance; Belongs to the CutC family.
 
     0.585
D271_05300
Collagen adhesion protein; COG4932 Predicted outer membrane protein.
 
  
  0.560
D271_00723
COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; Belongs to the glycosyl hydrolase 31 family.
   
 
  0.514
D271_02534
Putative mucus binding protein.
    
  0.511
D271_02384
Phage portal protein, SPP1 Gp6-like.
    
  0.507
D271_04815
Phosphatase; COG0671 Membrane-associated phospholipid phosphatase.
  
     0.504
Your Current Organism:
Lactobacillus saerimneri
NCBI taxonomy Id: 1227363
Other names: L. saerimneri 30a, Lactobacillus saerimneri 30a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.