STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D271_02904Hypothetical protein. (362 aa)    
Predicted Functional Partners:
D271_07554
Mucus binding protein.
  
     0.700
D271_02899
COG1051 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
       0.517
D271_02909
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
 
    
0.500
D271_05770
Transposon related peptidoglycan linked protein (LPXTG motif).
  
     0.487
D271_02834
Hypothetical protein.
  
     0.473
D271_00918
COG0584 Glycerophosphoryl diester phosphodiesterase.
  
     0.462
D271_01954
COG2404 Predicted phosphohydrolase (DHH superfamily).
  
     0.438
D271_02829
Hypothetical protein.
  
     0.435
D271_02844
COG0720 6-pyruvoyl-tetrahydropterin synthase.
  
     0.428
D271_07270
Transposon related peptidoglycan linked protein (LPXTG motif).
  
     0.426
Your Current Organism:
Lactobacillus saerimneri
NCBI taxonomy Id: 1227363
Other names: L. saerimneri 30a, Lactobacillus saerimneri 30a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.