STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D271_06105GDSL-like lipase/acylhydrolase; COG2755 Lysophospholipase L1 and related esterases. (310 aa)    
Predicted Functional Partners:
D271_06100
COG4698 Uncharacterized protein conserved in bacteria.
 
  
 0.980
D271_06095
COG4479 Uncharacterized protein conserved in bacteria; Belongs to the UPF0346 family.
 
  
 0.947
D271_02314
Hypothetical protein.
  
   0.869
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
  
    0.792
D271_06085
Hypothetical protein.
 
     0.768
D271_02319
COG4722 Phage-related protein.
  
   0.717
D271_01517
Phage tail tape measure protein, TP901 family; COG5283 Phage-related tail protein.
   
   0.708
D271_01488
Putative secreted protein.
  
  0.699
D271_02064
COG1358 Ribosomal protein HS6-type (S12/L30/L7a).
  
  0.699
D271_03375
Putative secreted protein.
  
  0.699
Your Current Organism:
Lactobacillus saerimneri
NCBI taxonomy Id: 1227363
Other names: L. saerimneri 30a, Lactobacillus saerimneri 30a
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