STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D271_06760Glucokinase; COG1940 Transcriptional regulator/sugar kinase. (321 aa)    
Predicted Functional Partners:
D271_02689
PTS system transporter subunit IIABC trhalose specific; COG2190 Phosphotransferase system IIA components.
  
 0.999
D271_02889
PTS system sucrose-specific transporter subunits IIBCA; COG1264 Phosphotransferase system IIB components.
  
 0.999
pgi
COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
 
 
 0.995
D271_00080
COG0191 Fructose/tagatose bisphosphate aldolase.
    
 0.983
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
 
 0.983
D271_03485
Phosphoglucomutase; COG1109 Phosphomannomutase.
 
 
 0.980
D271_00828
PTS system fructose-specific transporter subunit IIABC; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
  
 
 0.979
D271_02094
Aldose 1-epimerase; COG2017 Galactose mutarotase and related enzymes.
 
 
 0.971
D271_01143
3-ketoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.964
D271_01243
COG0191 Fructose/tagatose bisphosphate aldolase.
    
 0.957
Your Current Organism:
Lactobacillus saerimneri
NCBI taxonomy Id: 1227363
Other names: L. saerimneri 30a, Lactobacillus saerimneri 30a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.