STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C444_05991COG3119 Arylsulfatase A and related enzymes. (301 aa)    
Predicted Functional Partners:
C444_09777
COG3119 Arylsulfatase A and related enzymes.
  
     0.643
C444_19352
Sulfatase; COG3119 Arylsulfatase A and related enzymes.
  
     0.638
C444_05466
Sulfatase; COG3119 Arylsulfatase A and related enzymes.
  
     0.618
C444_10724
COG3119 Arylsulfatase A and related enzymes.
  
     0.602
C444_01306
COG0078 Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
   
    0.583
C444_12187
COG3119 Arylsulfatase A and related enzymes.
  
     0.539
C444_14307
Glucose 1-dehydrogenase/short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
   0.530
C444_04257
3-oxoacyl-ACP reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
   0.527
C444_15378
Sulfatase arylsulfatase A-like protein.
 
     0.521
C444_04946
Hydrolase; COG3250 Beta-galactosidase/beta-glucuronidase.
  
 0.513
Your Current Organism:
Haloarcula japonica
NCBI taxonomy Id: 1227453
Other names: H. japonica DSM 6131, Haloarcula japonica DSM 6131
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.