STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C444_14466COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit. (118 aa)    
Predicted Functional Partners:
C444_14441
Monovalent cation/H+ antiporter subunit E; COG0143 Methionyl-tRNA synthetase.
 
 
 0.999
C444_14451
COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit.
 
 
 0.999
C444_14456
COG2111 Multisubunit Na+/H+ antiporter, MnhB subunit; overlaps another CDS with the same product name.
 
 
 0.999
C444_14461
COG2111 Multisubunit Na+/H+ antiporter, MnhB subunit; overlaps another CDS with the same product name.
 
 
 0.999
C444_04107
NADH dehydrogenase subunit CD (ubiquinone); COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
   
  0.998
C444_06456
NADH dehydrogenase subunit CD (ubiquinone); COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
   
  0.998
C444_14471
Putative monovalent cation/H+ antiporter subunit D/NADH dehydrogenase/oxidoreductase; COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit.
 
 0.998
C444_14476
COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; overlaps another CDS with the same product name.
 
 0.998
C444_14481
COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; overlaps another CDS with the same product name.
 
 0.998
C444_06426
COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.
 
 0.987
Your Current Organism:
Haloarcula japonica
NCBI taxonomy Id: 1227453
Other names: H. japonica DSM 6131, Haloarcula japonica DSM 6131
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