STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C449_10361Beta-lactamase domain-containing protein; COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III. (261 aa)    
Predicted Functional Partners:
C449_10351
COG1201 Lhr-like helicases.
   
   0.546
C449_10356
Hypothetical protein.
       0.544
C449_07590
COG1045 Serine acetyltransferase.
  
  
 0.464
Your Current Organism:
Halococcus saccharolyticus
NCBI taxonomy Id: 1227455
Other names: H. saccharolyticus DSM 5350, Halococcus saccharolyticus DSM 5350
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.