STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C451_01538Hypothetical protein; COG1266 Predicted metal-dependent membrane protease. (212 aa)    
Predicted Functional Partners:
C451_14930
Fe3+-hydroxamate ABC transporter substrate-binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
  
     0.699
C451_13069
Hypothetical protein.
 
  
 0.665
C451_06020
COG3463 Predicted membrane protein.
  
     0.660
C451_08503
Hypothetical protein.
  
     0.656
C451_01878
Hypothetical protein; COG0358 DNA primase (bacterial type).
  
     0.636
C451_07052
Kelch repeat-containing protein.
  
     0.623
C451_12145
Alpha beta-propellor repeat-containing integrin.
  
    0.619
C451_14860
COG3463 Predicted membrane protein.
  
     0.598
C451_02759
Peptidase M48 Ste24p; COG0501 Zn-dependent protease with chaperone function.
  
     0.596
C451_14855
COG3463 Predicted membrane protein.
  
     0.595
Your Current Organism:
Halococcus thailandensis
NCBI taxonomy Id: 1227457
Other names: H. thailandensis JCM 13552, Halococcus thailandensis JCM 13552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.