STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C451_03219COG1620 L-lactate permease. (116 aa)    
Predicted Functional Partners:
C451_15928
4Fe-4S binding protein; COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain.
 
  
 0.940
C451_15938
Oxidoreductase (glycolate oxidase iron-sulfur subunit); COG0277 FAD/FMN-containing dehydrogenases.
 
  
 0.928
C451_02243
COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases.
  
  
 0.839
C451_12829
COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases.
  
  
 0.839
glpC
Sn-glycerol-3-phosphate dehydrogenase subunit C; COG0247 Fe-S oxidoreductase.
 
  
 0.807
C451_14180
FAD-linked oxidase domain protein; COG0277 FAD/FMN-containing dehydrogenases.
 
  
 0.729
C451_08975
Iron-sulfur protein (4Fe-4S); COG0247 Fe-S oxidoreductase.
  
  
 0.715
C451_10205
COG0039 Malate/lactate dehydrogenases; Belongs to the LDH/MDH superfamily.
  
  
 0.665
C451_06902
COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
     
 0.524
C451_15933
Hypothetical protein.
  
  
 0.516
Your Current Organism:
Halococcus thailandensis
NCBI taxonomy Id: 1227457
Other names: H. thailandensis JCM 13552, Halococcus thailandensis JCM 13552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.