STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C451_09025Hypothetical protein. (121 aa)    
Predicted Functional Partners:
C451_16740
PRC-barrel domain-containing protein.
  
    0.739
C451_03214
Replication factor A; COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins.
  
     0.724
C451_18453
Transmembrane oligosaccharyl transferase; COG1287 Uncharacterized membrane protein, required for N-linked glycosylation.
  
     0.724
C451_05243
Replication factor A; COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins.
  
     0.723
C451_10500
COG0681 Signal peptidase I.
  
     0.723
C451_00420
COG0681 Signal peptidase I.
  
     0.720
C451_17575
COG1745 Predicted metal-binding protein.
  
    0.720
C451_19798
Replication factor A; COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins.
  
     0.714
C451_14750
COG3389 Uncharacterized protein conserved in archaea.
  
     0.712
C451_07047
COG4749 Uncharacterized protein conserved in archaea.
  
     0.710
Your Current Organism:
Halococcus thailandensis
NCBI taxonomy Id: 1227457
Other names: H. thailandensis JCM 13552, Halococcus thailandensis JCM 13552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.