STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C451_09230COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (281 aa)    
Predicted Functional Partners:
C451_10530
COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases; bis(5'-nucleosyl)-tetraphosphatase (symmetrical).
    
 0.900
C451_11350
Branched-chain alpha-keto acid dehydrogenase subunit E2; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.
    
 0.807
menD
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC).
 
 
 0.695
C451_13356
NADH oxidase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 
 
 0.668
C451_04241
COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
 
 
 0.639
C451_15843
COG1454 Alcohol dehydrogenase, class IV.
  
  
 0.613
C451_15255
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
  
 
0.605
C451_02218
Protein containing nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase domain; COG0388 Predicted amidohydrolase.
  
  
 0.562
C451_19163
COG0015 Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.558
trpA
Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
     
 0.549
Your Current Organism:
Halococcus thailandensis
NCBI taxonomy Id: 1227457
Other names: H. thailandensis JCM 13552, Halococcus thailandensis JCM 13552
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