Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C451_01368 | C451_07707 | C451_01368 | C451_07707 | NUDIX hydrolase. | COG1056 Nicotinamide mononucleotide adenylyltransferase. | 0.652 |
C451_01368 | C451_11653 | C451_01368 | C451_11653 | NUDIX hydrolase. | COG1488 Nicotinic acid phosphoribosyltransferase. | 0.667 |
C451_01368 | C451_14530 | C451_01368 | C451_14530 | NUDIX hydrolase. | CinA domain-containing protein; COG1546 Uncharacterized protein (competence- and mitomycin-induced). | 0.573 |
C451_01368 | C451_16725 | C451_01368 | C451_16725 | NUDIX hydrolase. | COG0061 Predicted sugar kinase. | 0.460 |
C451_01368 | nadE | C451_01368 | C451_09720 | NUDIX hydrolase. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | 0.532 |
C451_01368 | nadK | C451_01368 | C451_10985 | NUDIX hydrolase. | Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.460 |
C451_02567 | nadE | C451_02567 | C451_09720 | Gln-dependent amino transferase; COG0367 Asparagine synthase (glutamine-hydrolyzing). | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | 0.718 |
C451_07027 | C451_16725 | C451_07027 | C451_16725 | Putative inositol-1(or 4)-monophosphatase / fructose-1,6-bisphosphatase, archaeal type; COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family. | COG0061 Predicted sugar kinase. | 0.615 |
C451_07027 | nadE | C451_07027 | C451_09720 | Putative inositol-1(or 4)-monophosphatase / fructose-1,6-bisphosphatase, archaeal type; COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | 0.589 |
C451_07027 | nadK | C451_07027 | C451_10985 | Putative inositol-1(or 4)-monophosphatase / fructose-1,6-bisphosphatase, archaeal type; COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family. | Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.628 |
C451_07707 | C451_01368 | C451_07707 | C451_01368 | COG1056 Nicotinamide mononucleotide adenylyltransferase. | NUDIX hydrolase. | 0.652 |
C451_07707 | C451_11653 | C451_07707 | C451_11653 | COG1056 Nicotinamide mononucleotide adenylyltransferase. | COG1488 Nicotinic acid phosphoribosyltransferase. | 0.835 |
C451_07707 | C451_14530 | C451_07707 | C451_14530 | COG1056 Nicotinamide mononucleotide adenylyltransferase. | CinA domain-containing protein; COG1546 Uncharacterized protein (competence- and mitomycin-induced). | 0.775 |
C451_07707 | C451_16725 | C451_07707 | C451_16725 | COG1056 Nicotinamide mononucleotide adenylyltransferase. | COG0061 Predicted sugar kinase. | 0.737 |
C451_07707 | nadE | C451_07707 | C451_09720 | COG1056 Nicotinamide mononucleotide adenylyltransferase. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | 0.740 |
C451_07707 | nadK | C451_07707 | C451_10985 | COG1056 Nicotinamide mononucleotide adenylyltransferase. | Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.737 |
C451_09725 | C451_11653 | C451_09725 | C451_11653 | Isochorismatase; COG1335 Amidases related to nicotinamidase. | COG1488 Nicotinic acid phosphoribosyltransferase. | 0.783 |
C451_09725 | C451_14530 | C451_09725 | C451_14530 | Isochorismatase; COG1335 Amidases related to nicotinamidase. | CinA domain-containing protein; COG1546 Uncharacterized protein (competence- and mitomycin-induced). | 0.463 |
C451_09725 | nadE | C451_09725 | C451_09720 | Isochorismatase; COG1335 Amidases related to nicotinamidase. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | 0.611 |
C451_11653 | C451_01368 | C451_11653 | C451_01368 | COG1488 Nicotinic acid phosphoribosyltransferase. | NUDIX hydrolase. | 0.667 |
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