STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilvEBranched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (304 aa)    
Predicted Functional Partners:
ilvD
COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
  
 0.976
C451_10525
COG0527 Aspartokinases; Belongs to the aspartokinase family.
 
 
 0.904
C451_17980
Pyruvate carboxyltransferase; COG0119 Isopropylmalate/homocitrate/citramalate synthases.
 
 0.898
C451_07182
(R)-citramalate synthase; COG0119 Isopropylmalate/homocitrate/citramalate synthases; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
 0.897
C451_08468
COG0460 Homoserine dehydrogenase.
  
 
 0.846
C451_09827
COG1171 Threonine dehydratase.
  
 
 0.828
C451_16033
COG1171 Threonine dehydratase.
  
 
 0.828
C451_17970
COG0440 Acetolactate synthase, small (regulatory) subunit.
  
 0.821
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
 
 
 0.814
C451_10710
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; cystathionine gamma-synthase, cystathionine gamma-lyase, cystathionine beta-lyase.
   
 0.771
Your Current Organism:
Halococcus thailandensis
NCBI taxonomy Id: 1227457
Other names: H. thailandensis JCM 13552, Halococcus thailandensis JCM 13552
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