STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C451_14915COG1271 Cytochrome bd-type quinol oxidase, subunit 1. (473 aa)    
Predicted Functional Partners:
C451_14910
COG1294 Cytochrome bd-type quinol oxidase, subunit 2.
 
 0.999
C451_14905
Hypothetical protein.
       0.806
C451_06902
COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
      
 0.641
C451_07912
COG0506 Proline dehydrogenase.
  
  
 0.629
glpC
Sn-glycerol-3-phosphate dehydrogenase subunit C; COG0247 Fe-S oxidoreductase.
  
  
  0.588
C451_13786
COG3075 Anaerobic glycerol-3-phosphate dehydrogenase.
  
  
  0.567
C451_18103
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG1252 NADH dehydrogenase, FAD-containing subunit.
 
   
 0.474
C451_14026
COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
  
   
 0.469
C451_00975
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG1252 NADH dehydrogenase, FAD-containing subunit.
 
   
 0.467
C451_15778
COG1252 NADH dehydrogenase, FAD-containing subunit.
 
   
 0.465
Your Current Organism:
Halococcus thailandensis
NCBI taxonomy Id: 1227457
Other names: H. thailandensis JCM 13552, Halococcus thailandensis JCM 13552
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