STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C451_19018Hypothetical protein; COG0433 Predicted ATPase. (551 aa)    
Predicted Functional Partners:
C451_19008
NurA domain-containing protein.
 
 
 
 0.972
C451_19013
Hypothetical protein.
 
     0.926
C451_18998
Metallophosphoesterase; COG0420 DNA repair exonuclease.
 
   
 0.902
C451_19003
SMC domain-containing protein; COG0419 ATPase involved in DNA repair.
 
   
 0.893
C451_16430
COG1888 Uncharacterized protein conserved in archaea.
  
     0.473
C451_18993
COG1184 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family; Belongs to the eIF-2B alpha/beta/delta subunits family.
       0.414
Your Current Organism:
Halococcus thailandensis
NCBI taxonomy Id: 1227457
Other names: H. thailandensis JCM 13552, Halococcus thailandensis JCM 13552
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.