STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C463_03277Hypothetical protein. (43 aa)    
Predicted Functional Partners:
C463_02501
COG0209 Ribonucleotide reductase, alpha subunit.
       0.634
C463_03694
Ribonucleoside-diphosphate reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
       0.634
C463_03282
Squalene/phytoene synthase; COG1562 Phytoene/squalene synthetase.
       0.568
C463_03272
Hypothetical protein.
       0.528
C463_03287
Hypothetical protein.
       0.468
Your Current Organism:
Halorubrum californiensis
NCBI taxonomy Id: 1227465
Other names: H. californiensis DSM 19288, Halorubrum californiensis DSM 19288
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.