STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C464_08320NAD operon protein. (307 aa)    
Predicted Functional Partners:
C464_08315
COG1056 Nicotinamide mononucleotide adenylyltransferase.
     
 0.819
guaAB
GMP synthase subunit B; Catalyzes the synthesis of GMP from XMP.
  
  
  0.552
C464_03292
Damage inducible protein CinA; COG1546 Uncharacterized protein (competence- and mitomycin-induced).
  
  
  0.546
C464_06728
Ham1 family protein; COG0127 Xanthosine triphosphate pyrophosphatase.
  
  
  0.544
C464_14905
COG1488 Nicotinic acid phosphoribosyltransferase.
  
  
  0.541
C464_07715
COG2820 Uridine phosphorylase.
  
  
  0.521
C464_14230
COG2820 Uridine phosphorylase.
  
  
  0.515
C464_07950
COG0015 Adenylosuccinate lyase.
    
  0.514
C464_07955
COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN.
    
  0.488
C464_08310
COG1067 Predicted ATP-dependent protease; Belongs to the peptidase S16 family.
       0.484
Your Current Organism:
Halorubrum coriense
NCBI taxonomy Id: 1227466
Other names: H. coriense DSM 10284, Halorubrum coriense DSM 10284
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