STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C464_09392FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases. (412 aa)    
Predicted Functional Partners:
C464_02018
Formate dehydrogenase alpha subunit; COG3383 Uncharacterized anaerobic dehydrogenase.
 
  
 0.944
C464_14015
FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating).
   
 0.643
C464_15445
FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating).
   
 0.643
C464_10348
Rieske iron sulfur protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
  
 0.606
C464_13535
Rieske (2Fe-2S) domain protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
  
 0.606
C464_00634
COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.
 
 
 0.563
C464_09387
PAS/PAC sensor signal transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
    
  0.539
C464_09397
Hypothetical protein.
       0.499
C464_07720
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG1252 NADH dehydrogenase, FAD-containing subunit.
 
 
 0.496
C464_09402
Hypothetical protein.
       0.487
Your Current Organism:
Halorubrum coriense
NCBI taxonomy Id: 1227466
Other names: H. coriense DSM 10284, Halorubrum coriense DSM 10284
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