STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C464_10698COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases. (653 aa)    
Predicted Functional Partners:
C464_07625
2-methylcitrate synthase/citrate synthase II; COG0372 Citrate synthase.
  
 0.960
C464_01771
CoA-binding protein; COG1042 Acyl-CoA synthetase (NDP forming).
    
 0.954
C464_09007
COG1012 NAD-dependent aldehyde dehydrogenases.
   
 0.913
C464_10408
Thiolase; COG0183 Acetyl-CoA acetyltransferase.
  
 
 0.905
C464_13975
Nonspecific lipid-transfer protein (sterol carrier protein); COG0183 Acetyl-CoA acetyltransferase.
  
 
 0.905
C464_15155
Carbamoyl-phosphate synthase L chain ATP-binding protein; COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 0.893
C464_00629
Branched-chain alpha-keto acid dehydrogenase subunit E2; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.
  
 
 0.882
C464_15170
COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
  
 0.881
C464_09092
Pyruvate carboxyltransferase; COG0119 Isopropylmalate/homocitrate/citramalate synthases.
  
 
 0.876
C464_02853
COG0281 Malic enzyme.
   
 0.875
Your Current Organism:
Halorubrum coriense
NCBI taxonomy Id: 1227466
Other names: H. coriense DSM 10284, Halorubrum coriense DSM 10284
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