STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C467_01291COG1454 Alcohol dehydrogenase, class IV. (403 aa)    
Predicted Functional Partners:
C467_04767
CoA-binding protein; COG1042 Acyl-CoA synthetase (NDP forming).
    
 0.953
C467_04942
COG1064 Zn-dependent alcohol dehydrogenases.
  
 0.845
C467_02213
Alcohol dehydrogenase GroES domain protein; COG1064 Zn-dependent alcohol dehydrogenases.
  
 0.813
C467_08008
Alcohol dehydrogenase GroES domain protein; COG1064 Zn-dependent alcohol dehydrogenases.
  
 0.813
C467_05292
Sodium/hydrogen exchanger; COG0475 Kef-type K+ transport systems, membrane components.
   
    0.812
egsA
NAD(P)-dependent glycerol-1-phosphate dehydrogenase; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea. Belongs to the glycerol-1-phosphate dehydrogenase family.
 
 
 0.782
C467_13192
COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
 
 0.653
C467_13277
COG1012 NAD-dependent aldehyde dehydrogenases.
 
 0.651
gabD2
Succinic semialdehyde dehydrogenase; COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
 
 0.649
C467_12836
MaoC domain protein dehydratase; COG2030 Acyl dehydratase.
  
 
 0.640
Your Current Organism:
Halorubrum hochstenium
NCBI taxonomy Id: 1227481
Other names: H. hochstenium ATCC 700873, Halorubrum hochstenium ATCC 700873
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