STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C469_08925COG1691 NCAIR mutase (PurE)-related proteins. (265 aa)    
Predicted Functional Partners:
C469_09465
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; COG1606 ATP-utilizing enzymes of the PP-loop superfamily.
 
  
 0.964
C469_00811
Hypothetical protein; Belongs to the LarC family.
 
  
 0.925
C469_08920
Hypothetical protein.
       0.678
C469_08930
Excinuclease ABC subunit C; COG2827 Predicted endonuclease containing a URI domain.
       0.543
C469_06314
COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
    0.416
Your Current Organism:
Halorubrum lipolyticum
NCBI taxonomy Id: 1227482
Other names: H. lipolyticum DSM 21995, Halorubrum lipolyticum DSM 21995
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.