STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl12p50S ribosomal protein L12P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the eukaryotic ribosomal protein P1/P2 family. (112 aa)    
Predicted Functional Partners:
rps17E
COG1383 Ribosomal protein S17E; Belongs to the eukaryotic ribosomal protein eS17 family.
  
 
 0.999
rpl11p
50S ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family.
 
 0.999
rpl1P
50S ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release.
 
 0.999
rplP0
Acidic ribosomal protein P0; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.
 
 0.999
rpl21e
COG2139 Ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family.
  
 0.999
rpl37ae
Ribosomal L37ae protein; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL43 family.
  
 
 0.999
rpl44e
50S ribosomal protein L44e; Binds to the 23S rRNA.
  
 0.999
rps15p
COG0184 Ribosomal protein S15P/S13E.
   
 
 0.999
rps3ae
COG1890 Ribosomal protein S3AE; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 
 0.999
rps12P
30S ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.
   
   0.999
Your Current Organism:
Halovivax asiaticus
NCBI taxonomy Id: 1227490
Other names: H. asiaticus JCM 14624, Halovivax asiaticus JCM 14624
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