STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C479_13938Hypothetical protein; COG0730 Predicted permeases. (225 aa)    
Predicted Functional Partners:
C479_13943
Hypothetical protein.
       0.618
C479_13928
5'-Nucleotidase domain protein; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
 
    0.584
C479_13933
Hypothetical protein.
       0.572
C479_01671
Molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein; COG0303 Molybdopterin biosynthesis enzyme.
       0.489
C479_01146
biotin--acetyl-CoA-carboxylase ligase; COG1654 Biotin operon repressor.
       0.426
Your Current Organism:
Halovivax asiaticus
NCBI taxonomy Id: 1227490
Other names: H. asiaticus JCM 14624, Halovivax asiaticus JCM 14624
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.