STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnaAtryptophanase/L-cysteine desulfhydrase, PLP-dependent; COG3033 Tryptophanase. (450 aa)    
Predicted Functional Partners:
trpA
Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
     
 0.759
hutH
COG2986 Histidine ammonia-lyase.
     
 0.750
mfnA
L-tyrosine decarboxylase; Catalyzes the decarboxylation of L-aspartate to produce beta- alanine; Belongs to the group II decarboxylase family. MfnA subfamily.
     
 0.730
trpB
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
     
 0.725
trpB-2
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
     
 0.725
C483_02965
ThiJ/PfpI domain-containing protein; COG0693 Putative intracellular protease/amidase.
  
 
   0.663
C483_16226
COG0031 Cysteine synthase.
     
 0.649
C483_17178
Pyridoxal-5'-phosphate-dependent protein subunit beta; COG0031 Cysteine synthase.
     
 0.649
C483_09746
ThiJ/PfpI domain-containing protein; COG0693 Putative intracellular protease/amidase.
    
   0.615
C483_11041
COG0527 Aspartokinases; Belongs to the aspartokinase family.
       0.530
Your Current Organism:
Natrialba hulunbeirensis
NCBI taxonomy Id: 1227493
Other names: N. hulunbeirensis JCM 10989, Natrialba hulunbeirensis JCM 10989
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