STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C483_16768COG1960 Acyl-CoA dehydrogenases. (383 aa)    
Predicted Functional Partners:
C483_06817
COG2025 Electron transfer flavoprotein, alpha subunit.
 0.915
C483_17528
NADH-ubiquinone oxidoreductase chain 49kDa; COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
   
 0.897
C483_02366
COG2025 Electron transfer flavoprotein, alpha subunit.
 0.877
C483_02361
COG2086 Electron transfer flavoprotein, beta subunit.
 
 
 0.855
C483_06822
COG2086 Electron transfer flavoprotein, beta subunit.
 
 
 0.854
C483_17918
propanoyl-CoA C-acyltransferase; COG0183 Acetyl-CoA acetyltransferase.
   
 0.845
C483_09691
Branched-chain alpha-keto acid dehydrogenase subunit E2; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.
   
 0.807
C483_16763
COG1250 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.799
C483_02980
propanoyl-CoA C-acyltransferase; COG0183 Acetyl-CoA acetyltransferase.
   
  0.784
C483_15252
3-ketoacyl-CoA thiolase; COG0183 Acetyl-CoA acetyltransferase.
   
  0.784
Your Current Organism:
Natrialba hulunbeirensis
NCBI taxonomy Id: 1227493
Other names: N. hulunbeirensis JCM 10989, Natrialba hulunbeirensis JCM 10989
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