STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C483_17053Sodium symporter protein; COG4147 Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (552 aa)    
Predicted Functional Partners:
C483_05013
COG0506 Proline dehydrogenase.
 
  
 0.816
C483_17058
Solute symporter protein.
       0.809
C483_17063
acetate/CoA ligase; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
  
  
 0.744
C483_17048
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
       0.735
C483_05553
COG1966 Carbon starvation protein, predicted membrane protein.
 
    0.721
C483_07227
2-methylcitrate synthase/citrate synthase II; COG0372 Citrate synthase.
   
  
 0.585
C483_02925
PAS fold-3 domain-containing protein; COG2202 FOG: PAS/PAC domain.
  
  
 0.584
C483_17073
acetate/CoA ligase; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
  
  
 0.580
C483_07387
COG1301 Na+/H+-dicarboxylate symporters.
  
  
 0.568
C483_11041
COG0527 Aspartokinases; Belongs to the aspartokinase family.
     
 0.564
Your Current Organism:
Natrialba hulunbeirensis
NCBI taxonomy Id: 1227493
Other names: N. hulunbeirensis JCM 10989, Natrialba hulunbeirensis JCM 10989
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