STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C491_00812Pyridoxal-5'-phosphate-dependent protein beta subunit; COG0498 Threonine synthase. (379 aa)    
Predicted Functional Partners:
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
 
 
 0.902
C491_00285
COG0460 Homoserine dehydrogenase.
 
 0.836
C491_00807
Succinylglutamate desuccinylase/aspartoacylase; COG3608 Predicted deacylase.
       0.819
C491_18129
COG1171 Threonine dehydratase.
 
 
0.789
C491_00602
COG1171 Threonine dehydratase.
  
 
0.745
C491_12620
COG1171 Threonine dehydratase.
  
 
 0.745
C491_12760
COG0498 Threonine synthase.
  
  
 
0.722
C491_06353
COG2008 Threonine aldolase.
     
 0.680
C491_07033
COG0527 Aspartokinases; Belongs to the aspartokinase family.
  
 
 0.631
C491_17824
COG0498 Threonine synthase.
  
  
 
0.588
Your Current Organism:
Natronococcus amylolyticus
NCBI taxonomy Id: 1227497
Other names: N. amylolyticus DSM 10524, Natronococcus amylolyticus DSM 10524
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