STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C491_15112Polyamine-transporting ATPase; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components. (382 aa)    
Predicted Functional Partners:
C491_06748
COG0555 ABC-type sulfate transport system, permease component.
 0.980
C491_15102
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
  
  0.954
C491_15107
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
  
  0.945
C491_15117
Hypothetical protein; COG0687 Spermidine/putrescine-binding periplasmic protein.
 
  
  0.921
C491_12690
Spermidine/putrescine ABC transporter ATP-binding protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 
  
 
0.833
C491_16147
Binding-protein-dependent transport system inner membrane protein; COG1176 ABC-type spermidine/putrescine transport system, permease component I; overlaps another CDS with the same product name.
 
  
  0.804
C491_16152
Binding-protein-dependent transport system inner membrane protein; COG1177 ABC-type spermidine/putrescine transport system, permease component II; overlaps another CDS with the same product name.
  
  0.801
C491_11268
COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
  
  
 
0.780
C491_06753
Extracellular solute-binding protein; COG0725 ABC-type molybdate transport system, periplasmic component.
    
  0.733
C491_02360
Carbohydrate ABC transporter substrate-binding protein, cut1 family; COG2182 Maltose-binding periplasmic proteins/domains.
    
 0.694
Your Current Organism:
Natronococcus amylolyticus
NCBI taxonomy Id: 1227497
Other names: N. amylolyticus DSM 10524, Natronococcus amylolyticus DSM 10524
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.