STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C493_18946Hypothetical protein; COG0687 Spermidine/putrescine-binding periplasmic protein. (335 aa)    
Predicted Functional Partners:
C493_18876
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 
 0.931
C493_17561
Binding-protein-dependent transport system inner membrane protein; COG1177 ABC-type spermidine/putrescine transport system, permease component II; overlaps another CDS with the same product name.
 
 
 0.930
C493_20334
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 
 0.929
C493_17566
Binding-protein-dependent transport system inner membrane protein; COG1176 ABC-type spermidine/putrescine transport system, permease component I; overlaps another CDS with the same product name.
 
 
 0.921
C493_20339
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 
 0.920
C493_18871
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 
 0.919
C493_19933
Polyamine-transporting ATPase; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 
  
  0.826
C493_18881
Polyamine-transporting ATPase; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 
  
  0.825
C493_20329
Polyamine-transporting ATPase; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 
  
  0.642
C493_17571
COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
  
  
  0.522
Your Current Organism:
Natronolimnobius innermongolicus
NCBI taxonomy Id: 1227499
Other names: N. innermongolicus JCM 12255, Natronolimnobius innermongolicus JCM 12255
Server load: low (22%) [HD]