STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI43022.1Two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB. (592 aa)    
Predicted Functional Partners:
SEJ34270.1
Hypothetical protein.
0.995
SEI42994.1
Two component, sigma54 specific, transcriptional regulator, Fis family.
 0.980
SEJ79804.1
Signal transduction histidine kinase.
 
 0.898
SEJ31780.1
Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
   
    0.839
SEJ13906.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
 
0.827
SEI49303.1
Two component, sigma54 specific, transcriptional regulator, Fis family.
 0.769
SEJ06683.1
Two-component system, NtrC family, nitrogen regulation response regulator GlnG.
 0.769
SEJ86885.1
Hypothetical protein.
  
     0.761
SEJ06760.1
Two-component system, NtrC family, nitrogen regulation response regulator NtrX.
 0.759
SEI42968.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
       0.741
Your Current Organism:
Cribrihabitans marinus
NCBI taxonomy Id: 1227549
Other names: C. marinus, CGMCC 1.13219, Cribrihabitans marinus Chen et al. 2014, DSM 29340, JCM 19401, Phaeobacter sp. CZ-AM5, strain CZ-AM5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.