STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI53656.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
SEI53682.1
Hypothetical protein.
     
 0.777
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.674
SEJ94080.1
Hemolysin-type calcium-binding repeat-containing protein.
    
  0.576
SEI46579.1
beta-N-acetylhexosaminidase.
  
 
 0.554
SEJ98049.1
Putative efflux protein, MATE family.
 
   
 0.553
SEI53718.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.526
SEI53625.1
Protein of unknown function.
       0.511
SEI69016.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
  
 0.476
SEI71625.1
Hypothetical protein.
  
     0.465
SEI53752.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
 
     0.463
Your Current Organism:
Cribrihabitans marinus
NCBI taxonomy Id: 1227549
Other names: C. marinus, CGMCC 1.13219, Cribrihabitans marinus Chen et al. 2014, DSM 29340, JCM 19401, Phaeobacter sp. CZ-AM5, strain CZ-AM5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.