STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI69168.1Hypothetical protein. (488 aa)    
Predicted Functional Partners:
SEI68729.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.925
SEI69117.1
Acyl transferase domain-containing protein.
 
    0.914
SEI69076.1
Hypothetical protein.
 
  
 0.903
SEI69215.1
Polymer biosynthesis protein, WecB/TagA/CpsF family; Belongs to the glycosyltransferase 26 family.
 
   
 0.902
SEI69016.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
 
     0.896
SEI68678.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.880
SEI68959.1
4'-phosphopantetheinyl transferase EntD (siderophore biosynthesis); Belongs to the P-Pant transferase superfamily.
 
     0.872
SEI68860.1
Hypothetical protein.
 
     0.869
SEI68821.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.864
SEI68769.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.842
Your Current Organism:
Cribrihabitans marinus
NCBI taxonomy Id: 1227549
Other names: C. marinus, CGMCC 1.13219, Cribrihabitans marinus Chen et al. 2014, DSM 29340, JCM 19401, Phaeobacter sp. CZ-AM5, strain CZ-AM5
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