STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ01712.1Phage conserved hypothetical protein. (69 aa)    
Predicted Functional Partners:
SEJ01663.1
Phage tail tube protein, GTA-gp10.
 
    0.958
SEJ01757.1
Phage tail tape measure protein, lambda family.
 
     0.954
SEJ01472.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
     0.949
SEJ01521.1
Head-tail adaptor.
 
    0.947
SEJ01567.1
Protein of unknown function.
 
     0.947
SEJ01625.1
Phage major tail protein, TP901-1 family.
 
    0.940
SEJ01848.1
Phage conserved hypothetical protein BR0599.
 
     0.926
SEJ01806.1
TIGR02217 family protein.
 
     0.912
SEJ01899.1
Putative phage cell wall peptidase, NlpC/P60 family.
 
     0.905
SEJ01949.1
Putative phage tail protein.
 
     0.894
Your Current Organism:
Cribrihabitans marinus
NCBI taxonomy Id: 1227549
Other names: C. marinus, CGMCC 1.13219, Cribrihabitans marinus Chen et al. 2014, DSM 29340, JCM 19401, Phaeobacter sp. CZ-AM5, strain CZ-AM5
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