STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ38581.1Glycosyl transferase family 2. (328 aa)    
Predicted Functional Partners:
SEJ38612.1
Core-2/I-Branching enzyme.
 
   
 0.963
SEJ38649.1
Hypothetical protein.
 
     0.956
SEJ38360.1
ABC-type polysaccharide/polyol phosphate export permease.
 
  
 0.865
SEI69016.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
 
 0.829
SEJ81393.1
Sulfotransferase family protein.
 
 
  0.812
SEJ36206.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
 
 0.798
SEI42859.1
Hypothetical protein.
  
 
   0.790
SEI70812.1
Capsular polysaccharide transport system ATP-binding protein.
 
  
 0.788
SEI70765.1
Capsular polysaccharide transport system permease protein.
 
    0.778
SEI51282.1
Capsular polysaccharide export protein.
 
     0.770
Your Current Organism:
Cribrihabitans marinus
NCBI taxonomy Id: 1227549
Other names: C. marinus, CGMCC 1.13219, Cribrihabitans marinus Chen et al. 2014, DSM 29340, JCM 19401, Phaeobacter sp. CZ-AM5, strain CZ-AM5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.