STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ27586.1Hypothetical protein. (432 aa)    
Predicted Functional Partners:
SEI42193.1
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.988
SEJ27542.1
Hypothetical protein.
  
 0.987
SEJ99039.1
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.979
SEJ27649.1
anti-ECFsigma factor, ChrR.
 
  
 0.971
SEJ27445.1
Protein of unknown function.
 
   
 0.964
SEJ27407.1
Short-chain dehydrogenase.
 
   
 0.958
SEJ27495.1
Glycoside/pentoside/hexuronide:cation symporter, GPH family.
 
   
 0.953
SEJ27619.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
  
 0.872
ctaG
Cytochrome c oxidase assembly protein subunit 11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
      0.845
SEI42225.1
Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family.
 
   
 0.731
Your Current Organism:
Cribrihabitans marinus
NCBI taxonomy Id: 1227549
Other names: C. marinus, CGMCC 1.13219, Cribrihabitans marinus Chen et al. 2014, DSM 29340, JCM 19401, Phaeobacter sp. CZ-AM5, strain CZ-AM5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.