Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI67039.1 | SEJ98753.1 | SAMN05444007_10298 | SAMN05444007_110113 | Regulatory protein, luxR family. | Cytochrome b. | 0.618 |
SEJ06277.1 | SEJ98753.1 | SAMN05444007_103240 | SAMN05444007_110113 | Cytochrome c556. | Cytochrome b. | 0.577 |
SEJ36206.1 | SEJ98753.1 | SAMN05444007_104265 | SAMN05444007_110113 | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. | Cytochrome b. | 0.485 |
SEJ98742.1 | SEJ98753.1 | SAMN05444007_110112 | SAMN05444007_110113 | Peptidase propeptide and YPEB domain-containing protein. | Cytochrome b. | 0.795 |
SEJ98742.1 | SEJ98767.1 | SAMN05444007_110112 | SAMN05444007_110114 | Peptidase propeptide and YPEB domain-containing protein. | Regulatory protein, luxR family. | 0.765 |
SEJ98753.1 | SEI67039.1 | SAMN05444007_110113 | SAMN05444007_10298 | Cytochrome b. | Regulatory protein, luxR family. | 0.618 |
SEJ98753.1 | SEJ06277.1 | SAMN05444007_110113 | SAMN05444007_103240 | Cytochrome b. | Cytochrome c556. | 0.577 |
SEJ98753.1 | SEJ36206.1 | SAMN05444007_110113 | SAMN05444007_104265 | Cytochrome b. | Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. | 0.485 |
SEJ98753.1 | SEJ98742.1 | SAMN05444007_110113 | SAMN05444007_110112 | Cytochrome b. | Peptidase propeptide and YPEB domain-containing protein. | 0.795 |
SEJ98753.1 | SEJ98767.1 | SAMN05444007_110113 | SAMN05444007_110114 | Cytochrome b. | Regulatory protein, luxR family. | 0.942 |
SEJ98767.1 | SEJ98742.1 | SAMN05444007_110114 | SAMN05444007_110112 | Regulatory protein, luxR family. | Peptidase propeptide and YPEB domain-containing protein. | 0.765 |
SEJ98767.1 | SEJ98753.1 | SAMN05444007_110114 | SAMN05444007_110113 | Regulatory protein, luxR family. | Cytochrome b. | 0.942 |