STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK04615.1Peptide/nickel transport system permease protein. (278 aa)    
Predicted Functional Partners:
SEK04600.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.995
SEK04607.1
Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  0.995
SEJ15118.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.987
SEJ10111.1
Peptide/nickel transport system ATP-binding protein.
 
 
  0.985
SEI40163.1
Peptide/nickel transport system ATP-binding protein/peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.984
SEJ97408.1
Peptide/nickel transport system ATP-binding protein/peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.984
SEJ95583.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.977
SEJ15071.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.976
SEJ97390.1
Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.972
SEJ10172.1
Peptide/nickel transport system ATP-binding protein.
 
 0.971
Your Current Organism:
Cribrihabitans marinus
NCBI taxonomy Id: 1227549
Other names: C. marinus, CGMCC 1.13219, Cribrihabitans marinus Chen et al. 2014, DSM 29340, JCM 19401, Phaeobacter sp. CZ-AM5, strain CZ-AM5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.